qmarcou IGoR issues - Githubissues

qmarcou / IGoR

IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:

https://qmarcou.github.io/IGoR/

GNU General Public License v3.0

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issues

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Undefined reference error during compling

#73 colejensen closed 1 week ago
0
Remove superfluous IMGT information in TCR beta model parms file

#72 zacmon opened 1 year ago
0
All 0 output in infer and question about L_thresh

#71 zhuyixin43 opened 1 year ago
0
installation from source

#70 gszep opened 1 year ago
0
IGoR over-estimating TCR V deletions?

#69 JamieHeather opened 1 year ago
0
segfault with gcc > 7

#68 sassy-crick opened 2 years ago
2
Fix issue #62

#67 mchernigovskaya opened 2 years ago
0
the result file foo_indexed_CDR3s.csv

#66 shwdmsh opened 2 years ago
1
How to get everyone sequence clonotype ?

#65 shwdmsh opened 2 years ago
0
Install error

#64 shwdmsh closed 2 years ago
2
Limiting IGoR's CPU usage

#63 yttyhhh closed 3 years ago
1
Segmentation Fault in -run_demo

#62 altanturkoglu opened 3 years ago
5
make check failures but make install worked

#61 zacmon closed 3 years ago
1
make new database

#60 fjptwenger opened 4 years ago
2
using the --coverage error

#59 bigbeauty-hub opened 4 years ago
0
Fix missing error pour unknown output or chain.

#58 qmarcou closed 4 years ago
0
Simplify class Rec_Event's constructors

#57 josephyu19850119 opened 4 years ago
0
Few of improvement for class Counter construction

#56 josephyu19850119 closed 4 years ago
1
Using the --coverage output subarg

#55 jeremycfd opened 4 years ago
1
Missing unknown subargument error for -output

#54 jeremycfd closed 4 years ago
1
Few of improvement for class Counter construction

#53 josephyu19850119 closed 4 years ago
2
Temporal bash script to calculate pgen value of a given sequence.

#52 alfaceor closed 4 years ago
0
Chain IGoR commands

#51 penuts7644 closed 4 years ago
1
Model edge gene choice relations differ

#50 penuts7644 closed 4 years ago
1
CDR3

#49 alfaceor closed 4 years ago
1
Errors: python to parse the output results?

#48 decenwang closed 4 years ago
2
File not found when IGoR is installed locally

#47 jdgagnon closed 5 years ago
1
about "iteration"of -evaluate

#46 decenwang closed 3 years ago
1
Compilation issue with Mac OS Mojave

#45 jdgagnon closed 5 years ago
2
what's the definition of model or contents of model?

#44 decenwang closed 3 years ago
2
finding non-productive sequences(original/no hypermutation/no insertion/no deletions)

#43 decenwang opened 5 years ago
2
request the command line for "-run_demo"

#42 decenwang closed 3 years ago
2
NaN likelihood and custom code section

#41 shen1025 closed 4 years ago
2
Issue: sample size of more than 100000 sequences

#40 kgrigaityte opened 5 years ago
1
error : make/make install

#39 sravani9408 closed 5 years ago
4
Fix bug into Hypermutationglobalerrorrate.cpp

#38 cosimolupo opened 5 years ago
0
Fix update_event_internal_probas out-of-bounds access

#37 Thopic closed 5 years ago
0
read-seqs input parameter improvement

#36 penuts7644 opened 5 years ago
2
Segmentation fault during inference

#35 Thopic opened 5 years ago
6
[Alignments] Ill defined reversed offset upon in/dels

#34 qmarcou opened 5 years ago
0
Format of genomic references files

#33 penuts7644 opened 5 years ago
1
Questions in alignment results

#32 Yyx2626 opened 5 years ago
5
Using IGoR for species not supplied

#31 zacmon opened 5 years ago
1
Paired end sequences and MiXCR.

#30 poorvamudgal opened 5 years ago
1
CDR3 anchors information and other models/ref_genome information

#29 zacmon opened 5 years ago
5
NaN values for (alpha) chain recombination probabilities!

#28 JonasMir opened 5 years ago
4
Separating pygor from IGoR repo.

#27 penuts7644 opened 5 years ago
2
Pygor - Small fix bestscenarios

#26 penuts7644 closed 5 years ago
3
Add built in support the mouse igH analysis

#25 adugduzhou opened 5 years ago
2
TRA CDR3 Anchors

#24 PimEnpicom closed 4 years ago
1