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Hi!
I am running Hifiasm v0.19.5-r593 with Hifi and ultra long oxford nanopore reads. However, after a few days running the process fail (core dump). I performed a selection of onp reads, using onl…
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**Is your feature request related to a problem? Please describe.**
No
**Describe the solution you'd like**
An option to use analog audio input into the Raspberry PI via USB soundcard or similar i…
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I setup my config file and I run snakemake --cores all --use-conda --configfile config_argania.yaml
here is the error :
Config file config/config.yaml is extended by additional config specified vi…
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hello
I have assembled two haplotypes using the hifiasm software based on HIC hifi ONT data. I am wondering if it is possible to utilize this software to inspect errors in the haplotype assemblies. I…
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I have a large genome (~5GB) with N50 ~3Mb, and 30X of Hi-C coverage (uniquely mapped reads)
The assembly is stuck at for two days. I moved to assemble the HiFi reads alone without the Hi-C, which I…
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Hello
I need some suggestions in simulating complex structural variants in Hifi reads file from PacBio
https://downloads.pacbcloud.com/public/dataset/HG002-CpG-methylation-202202/m64011_190830_22…
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I am working on PI 2 zero W with WM8960 Audio HAT https://www.waveshare.com/wiki/WM8960_Audio_HAT
raspberrypi-kernel : (1:1.20230405-1)
raspberrypi-kernel-headers: (1:1.20230405-1)
I did this:
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Hello,
Thanks for your software it is extremely useful.
I suppose this is just a shameless request for feature.
I have a slight misgiving on how number of passes and fragment length are not…
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I am running the Coveralls GitHub action in a monorepo, setting the `parallel` flag to `true` so that I can run the coverage jobs in parallel and batch-upload them at the end of the GitHub workflow ex…
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Apparently HiFi had done a lot of work on the Quest Interface that we don't have integrated yet.
Code is here: https://github.com/JulianGro/vircadia/pull/10
I think there might or might not be s…