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Hi
I need your personal point of view please
I have two `bulk RNA-seq` patients (PBMC) on which I run `mixcr`
For the same two patients I have `5' single cell` on which I run `TRUST4`
I a…
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It would nice if a function were provide to do this internally using `Rsamtools::sortBam()` instead of needing to use the command line tool.
https://github.com/rnabioco/raer/blob/97ec7f9901e0f95de9…
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https://mp.weixin.qq.com/s/2cLFOgaOecDrDypmv7mBpA
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Hi, I am trying to ran pipeline with my own data. I got an error, which is below.
Here is the code I ran:
```
came_inputs, (adata1, adata2) = pipeline.preprocess_unaligned(
adatas,
key_c…
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https://mp.weixin.qq.com/s/zj9qeZah50ZWLa0GbUCMpw
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Hi
I need your personal point of view please
I have two `bulk RNA-seq` patients (PBMC) on which I run `mixcr`
For the same two patients I have `5' single cell` on which I run `TRUST4`
I a…
-
Hi,
I am trying to compare your deconvolution method with Seurat integration method. To do so, I am trying to reproduce your vignette with some Visium public dataset (kidney mouse). Single cell dat…
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Dear TALON team,
Thank you so much for your interesting and helpful package!
As I am very new to the field of bioinformatics in general, I am not quite sure if this is the right place to ask here.…
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Hi
I need your personal point of view please
I have two `bulk RNA-seq` patients (PBMC) on which I run `mixcr`
For the same two patients I have `5' single cell` on which I run `TRUST4`
I a…
-
Hi,
I'm new to scRNA-seq analysis with Python, so following the tutorial example in:
https://uci-genpals.github.io/pseudotime/2021/02/09/scvelo-tutorial.html
My exact commands were:
```import…