-
The JBrowse drupal page needs data added for the above two species.
[LEGUME-518] created by sdash-legume
-
```
Develop fast scripts to interconvert between transcriptomic and genomic
coordinates.
This will facilitate building a purely genomic BAM file with mapping results
for viewing using genome browse…
-
In case this might have been buried in what turned out to be an unrelated email thread, I have encountered some sort of browser-dependent issue with access the tabix index file for VCF tracks.
I have…
-
Just dumping the error information before class starts:
```
/apollo/jbrowse/src/dojo/promise/instrumentation.js:20 DOMException: Failed to execute 'addColorStop' on 'CanvasGradient': The value provid…
-
```
Provide a BAM file in the final output containing the chimeric reads.
Will enable visualization of reads in genome browsers
```
Original issue reported on code.google.com by `matthew....@gmail…
-
```
Develop fast scripts to interconvert between transcriptomic and genomic
coordinates.
This will facilitate building a purely genomic BAM file with mapping results
for viewing using genome browse…
-
NCBI has annotation for chickpea created using their eukaryotic genome annotation pipeline. It would be useful to add this as a track to the cicer GBrowse.
The GFF is available here:
ftp://ftp.ncbi.…
-
http://gmod.827538.n3.nabble.com/Gmod-ajax-Integer-overflow-with-bigwig-files-td4051345.html
> A thread that is now getting pretty old from last year is still biting me (or biting me again, as I set …
-
There are 2 independent axes here: **intra**-contig orientation, and **inter**-contig orientation; each can be horizontal or vertical:
![](https://s3.amazonaws.com/f.cl.ly/items/2Q303R0o2A1919333T04/…
-
A topic that has come up in several task teams is the need to use inheritance concepts to model class hierarchies in our data models. This has come up specifically in the G2P and annotation task teams…