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we should be able to filter mutations by cancer type and population subgroups.
First, a user selects the dataset of mutations that are used (four datasets - TCGA cancer, ESP6500 population, 1000G po…
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_Originally reported by_: @paulclemons
i think this is related to the ongoing confusion about cell_sample versus tissue_sample, and how these need to be distinct lists and not "cross synonyms"
in th…
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```
This is the current list of tumor types that are being imported into the GDAC
portal. This list should be updated to reflect latest firehose export.
brca : Breast invasive carcinoma
coadread : …
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```
What steps will reproduce the problem?
1. Select Glioblastoma (TCGA) cancer study
2. Hit "Build Case Set" link
3. Uncheck the option "Yes" for the category "Array CGH Data", and hit Build
4. Submi…
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```
Reported by user:
I noticed that the website layout has recently changed and I cannot get the
same data that I was able to get on previous visits. Previously (May 2011) I
was able to download …
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As can be seen from the attached screenshot, if the list of interaction types and sources is too long, the content will not fit and Update button will not be displayed.
This screenshot was produced us…
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```
The build case set feature stops working when switching from one tumor type to
another.
To reproduce:
1 - Select ovarian cancer and build any case set
2 - Then select GBM and try to build anothe…
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Hello,
For the GO term request in https://sourceforge.net/tracker/?func=detail&aid=3604459&group\_id=36855&atid=440764, I'd need
CHEBI:NEW temozolomide
please.
I'm not sure what its is_a parentage …
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Sometimes Abstractor's native NLP capabilities will not be good enough. So we would like to be able to outsource the job of generating suggestions against narrative text to an external NLP library. …
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```
This is the current list of tumor types that are being imported into the GDAC
portal. This list should be updated to reflect latest firehose export.
brca : Breast invasive carcinoma
coadread : …