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**Please note we will close your issue without comment if you delete, do not read or do not fill out the issue checklist below and provide ALL the requested information. If you repeatedly fail to use …
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Installed 1.12.3 yesterday and the "volvox" directory works OK. Tried to install my data from a Maker2
run but that did not work.
```
cd /var/www/html/mathog
#account used has full access to th…
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I am running into a "Assertion `cnt > 0' failed" error in the assembly stage 4-unitigger. This is running on a cluster and so far this assembly ran without problems. I have restarted canu twice but th…
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I was trying to install libtorrent-rasterbar. I've successfully installed it before, not sure why it doesn't work now.
The exact copy-paste from command to error on Terminal:
```
$ brew install l…
ghost updated
6 years ago
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Dear Jon,
I have launched funannotate predict with the following parameters, and it has failed:
```
funannotate predict -i 901.masurca.scf.fasta -o 901.fun_out --species "Linum usitatissimum" -…
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Hi Pilon supporting staff,
I have problem about running pilon, the report is listed as follows: the genome size is 250mb, I am not sure if it is due to the java virtual memory is not enough.
> …
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Dear Jon,
I looked thoroughly at my previous funannotate results (derived a month ago) and found that **funannotate-p2g.py** seems to fail. As a result, finally, out of 500,000 proteins, tblastn ha…
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We don't have problems running Roary with GFF3 files from Prokka, but Roary dies when we try to use different GFF3 files (described at the end), even though all the GFF3 files have the nucleotide sequ…
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I run into `OSError: [Errno 13] Permission denied: '/MaSuRCA-3.2.1_09012016'` which I described here https://github.com/bioconda/bioconda-recipes/issues/3017
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Hello,
When I run the `make test`, I get following:
```
cd testsuite && env -i GT_MEM_BOOKKEEPING=on MAKE=make PATH="/data/apps/sge/bin:/data/apps/sge/bin/lx-amd64:/data/apps/openmpi/bin:/data/…