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Hello, microeco has very conveniently implemented lefse analysis, but I have the following two questions.
![PixPin_2024-09-14_11-32-39](https://github.com/user-attachments/assets/59f73bdb-439a-4594-8…
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Hi there,
I have two questions:
1. You have mentioned that "ONTbarcoder has been optimized for protein coding gene like COI. While **there are ways** to obtain consensus for length variable non …
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I just pushed on https://github.com/zauberzeug/field_friend/pull/181 and the test `test_driving_to_exact_positions` fails, but it works locally.
```
FAILED tests/test_navigation.py::test_driving_t…
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Hey all, I am starting to try to integrate kraken2 in my Mothur pipeline. I really love Mothur, but the taxonomic assignation is not optimal for my situation. This is a work in progress so far as I am…
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Hello All!
Im working with PacBio reads for the very first time. Compared to the tutorial, Im see im loosing really large number of reads. Below is the table:
Sample | ccs | primers | filtered…
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I wired [this](https://a.aliexpress.com/cbEiCZeHH) P4-2121-64*32-16s-hl1 panel (I believe it has an ICN2028BP chipset) and ran the demo scripts both as a chained 32x32 and as a single 64x32 but didn'…
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Replacing it by a more recent version fixes it. But you might also consider migrating to another versioning tool and PEP517 build system.
```
[ 15s] + /usr/bin/python3.12 setup.py build '--execu…
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Currently getting the following error.
Running /home/gjospin/phylosift_v1.0.0_02/bin/pplacer -o /home/gjospin/misc/Jason/EC_final/PS_temp_placements/JA16/treeDir/16s_reps_bac.long.1.jplace --verbosi…
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Update PICRUSt predictions of 16S copy number by including genome 16S copy number predictions from the updated rrnDB (for complete genomes) and the 16Stimator (for draft genomes).