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Let's do an RDKIT based example that shows the process of using SageWorks for rapid prototyping.
References:
- https://www.kaggle.com/code/vladislavkisin/tutorial-ml-in-chemistry-research-rdkit-mo…
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Hello
Before starting to update, the program indicated the following message (when I ran abricate --list):
DATABASE SEQUENCES DB TYPE DATE
ecoh 597 nucl 2018-Oct-20
ncbi 4579 nucl 2018-Oct-20
…
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Hi,
new AMRfinderplus user - very useful tool, thanks!
I may be missing something, but it appears that the only way to automatically download/build the database is through the amrfinder_update e…
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I am using prokka (an amazing program, BTW) to annotate bacterial genomes for submission to NCBI. Today, I uploaded the sqn files for 23 genomes, and the all failed. Looking at the error messages pr…
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Hi there,
Thanks for the amazing work adding increased support for veterinary microbiology. You're probably aware, but I just wanted to highlight that the CLSI have updated veterinary breakpoints …
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## New Term Request: Bulk Tank
### Suggested annotations:
**Parent class:** manufactured product [ENVO:00003074]
**Definition:** A manufactured product which used to safely store and/or transport…
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For new term requests, please provide the following information:
**Term Label** [required]
antifungal minimum inhibitory concentration
**Synonyms** [optional]
MIC of antifungal
MIC of antifung…
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Hi,
I follow the instruction to install and get the dependencies for SSTAR on Windows and on Linux. In both cases, blastn and makeblasdb were found in command line but SSTAR still say if makeblastdb…
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Briefly comment on this issue with reasons why you are interested in this mini-project.