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hi,
I have executed the DCC, the circular RNA counts and co-ordinates files are generated. For finding the CircSkipJunction I got the error mentioned below. Can you please guide me resolve this
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Description: I propose adding a new function molecular_weight() to the BioSequences package that calculates the average or monoisotopic molecular weight of a protein or nucleic acid sequence. The func…
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## Background
One of the goals of this application was to be able to adapt to different genome types other than sars, which is linear single stranded RNA.
## Can be closed when
- [ ] Distance m…
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We decided to start with two schemas: a minimal schema that we would post now as what we should implement, and then an extended schema, which is in evaluation stage to see if it should end up in the m…
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I got the following error when running RATTwithGFF:
> converting chromosome_1.gff to chromosome_1.embl....
usage: EMBLmyGFF3 [-h] [-a] [-c CREATED]
[-d {CON,PAT,EST,GSS,HTC,H…
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**I have predicted circRNAs in my samples using find_circ and am using the CIRIquant command to requantify the predicted circRNAs. This has been mostly successful insofar, however, lately I have been …
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Hello,
first sample was done very well, but my second sample is stucking. My shell output is the following:
-1 SID16126_S10_L001_R1_001.fastq.gz -2 SID16126_S10_L001_R2_001.fastq.gz
[Wed 2022-0…
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Hi，
I found some issues here：
1. when set -N HCOA1_new， there is a new directory named “HCOA1_new” created in output fold (many bam files and bai files in this fold)， BUT FUCHS will get a erro…
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Dear Torsten,
**first of all thanks for your efforts on Prokka ! The whole community owe you one.**
I annotated my assemblies with Prokka 1.14.6 with "--compliant" option.
When uploading the …