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Create a check that compares the numbers of genes with a specific data type in the data source file with the number of genes with that type of data in the gene descriptions file.
Example-the number o…
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BP says:
> I did a taxon validation thing and got the attached results at the first
> pass.
>
> 3- When I follow one of the "validate by hand" links, I see a list
> like this
>…
ghost updated
7 years ago
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Hello,
I am receiving the following error:
"The habitat geometry is not a valid ring (a ring is both simple and closed)
Let the habitat be the rectangle defined by (xmin, ymin) and (xmax, yxmax…
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I believe the issue is caused if the genome index is already built or it handles multiple fasta files during index building.
During multiple fasta file index building, if the _basename of the index …
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http://ensembl.caenorhabditis.org/Caenorhabditis_elegans/Gene/Summary?db=core;g=WBGene00004893;r=X:944939-948885;t=F53H8.4
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We have four files that we want to roll back to the last "good" source, as represented in the last release.
- [ ] tair: many issues, should be fixed week of May 1st
- [ ] mgi (see https://github.c…
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---
Author Name: **William Rice** (@wjrice)
Original Redmine Issue: 4973, https://emg.nysbc.org/redmine/issues/4973
Original Date: 2017-05-17
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I would like to be able to upload Helios images t…
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Just started using REPAC and was wondering about the annotation details, found in
```r
library("REPAC")
data("hg38_pa")
data("mm10_pa")
```
Both the human and the mouse annotation contains…
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Hello
I ran the following commands:
```
funannotate train -i XZ1516_ragtag_correct_scaffold_masked_nameChange.fasta -o funannotate_run/ \
--left XZ1516_S1_R1_001.fastq.gz \
--right XZ…
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Hi,
(thanks for a great application)
Toxic model averaging works fine, as far as I can judge, but I never get any GO/reactome/bioplanet results for Danio rerio although mouse and fruitfly works fine…