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A minimal viable solution must define how the information needs of the stakeholders are translated into queries and what the characteristics of the responses provided by the VP should be to fulfil tho…
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I know there has been a thread about this in the past: https://github.com/trinityrnaseq/trinityrnaseq/issues/1231
but there seems to me to be an issue that isn't clearly resolved or explained.
We …
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**Plan for your class project:**
We recently generated Illumina shotgun sequence data for the non-model plant organism (my study system), Geranium maculatum. I plan to evaluate genome structure with …
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Hi,
I'm trying to analyse some cases using REViewer included in STRipy pipeline. In the analysis of one of the cases I'm working on, specifically with the RFC1-AAGGG gene, I can see vertical black…
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Hello !
Thank you very much for your assistance and support.
I have a question regarding Spectra copy number analysis. Is this software only designed for diploid genomes? In the spectra-cn.hist …
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Hi developer,
I just want to make sure I am on the right track to make my own index. Because repbase is not openable, I downloaded the fasta file from GENCODE (Genome sequence, primary assembly (GR…
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The flat file list of genomes that were displayed in the tree should probably show up as a genome list when you click on it, so that you can build a genome group.
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Hi,
I wanted gene ontology analysis for marchantia genome RNA Seq data can I use this script for my analysis as blast2go is paid is there any issues will be there please help me.
Thank you
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Hi, I am looking for a method to quantify the effect of background selection along the genome in 20 diploid samples, I am wondering could diplos/HIC do this analysis. Could you share your help? Thank …
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Hello,
Please, I have done the "ufcg download -t full" and when I run the profile analysis with --set NUC , the tool is not finding any ITS gene for any of the genomes.
The other --set options are w…