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Thanks for your work on this promising tool! In regards to its applications to metagenomics, can radEmu handle length normalized data as input? In metagenomics, it is common to normalize counts to the…
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Dear friends:
I run CONCOCT from MetaWRAP v=1.1.3.
I have no idea how to debug this error. Please help me.
Here is the command:
```
==============================================================…
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Hi!
I'm working with a shotgun metagenomics data, and we aim to analyze the functional profile.
we have 224 samples in total, with 356 different pathways.
below are the codes that I used
metage…
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Hi Daniel,
I am trying to carve around 3000 genomes I obtained from a complete metagenomics dataset.
I was able to carve most of them, but the last ~150 are giving me a hard time.
Below is the ou…
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Hi,
I have run the binning module. I ran this order:
metawrap binning -o INITIAL_BINNING -t 40 -a ASSEMBLY_test/final_assembly.fasta --metabat2 --maxbin2 --concoct CLEAN_READS_test/ERR*…
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# Current Behavior
I installed autometa 2.2.2 in a mamba environment. I followed the [bash step by step tutorial](https://autometa.readthedocs.io/en/latest/bash-step-by-step-tutorial.html) with a s…
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### Description of the bug
I likely didn't create the sample sheet correctly or use the correct options. Sorry! I've attached the .nextflow.log as well as my sample sheet.
I ran the taxtriage test…
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### Operating System
macOS
### Other Linux
_No response_
### Workflow Version
wf-metagenomic v2.5.0
### Workflow Execution
EPI2ME Desktop application
### EPI2ME Version
_No response_
### CLI…
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Hi team,
I installed haystac following the instructions on github using mamba. I am running the program on AWS c5.9xlarge EC2 instance with 36cCPU 72GiB memory.
Linux version 5.15.0-1004-aws (bui…
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I got the following error using pb-metagenomics-tools. I tried temporarily disabling the firewall and changing the nameserver address, but it didn't work, so I'm asking this question.
Error in rule…