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the idea of summing up the data about insertions was sort of alluded to by @ihh when we were thinking about the bilby encoder
could also be done for skip and deletion and maybe other types also. …
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Dear m6A developers.
I wonder if you can advise on the best statistics to perform a differential m6A abundance analysis between two sample groups.
I've already successfully run m6anet v2.1 on my O…
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# General Notes
This repository serves as a mostly automa…
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Dear @all
I think this question would be more appropriate here, so I referenced it here (https://github.com/nanoporetech/dorado/issues/1089)
Thank you for your time.
Kind regards
Zheng zhuqi…
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I hope this message finds you well. I am currently working with second-generation sequencing methylation data from cattle, and I would like to use the Pan-mammalian clock3 to predict the age of my sam…
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**Is your feature request related to a problem? Please describe.**
To support sharing of methylation array data under controlled access our metadata model needs to support the commonly used file exte…
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Hello MerenLab,
While at EBAME I was encouraged to open this discussion by @FlorianTrigodet and @ivagljiva, and bring it to @semiller10's attention.
DNA methylation is on the verge of constituti…
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### Contact Details
_No response_
### Scripts
01-check_data.sh
### What happened?
We don't genotyped data on sex chromosomes and the probes on sex chromosomes were excluded in previous QC steps. …
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**Is your feature request related to a problem? Please describe.**
Implement an age clock measurement method for DNA methylation arrays
**Describe the solution you'd like**
Implement preprocessin…