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GoekeLab
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m6anet
Detection of m6A from direct RNA-Seq data
https://m6anet.readthedocs.io/
MIT License
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probability_modified and mod_ratio are 0
#168
lbwfff
opened
6 hours ago
0
Arabidopsis VIRC instead of col0 (wild type)
#166
haotianteng
opened
1 month ago
3
empty dataprep data.json and data.log
#165
nickst85
opened
1 month ago
5
The position output by m6anet seems to be 1 less than the actual position
#164
wfy1373
opened
1 month ago
1
Issues with Read Selection
#163
AKjhu
opened
2 months ago
2
m6anet dataprep fails to complete: cannot convert float NaN to integer
#162
nmichaels89
closed
3 months ago
3
Interpreting 'inference' results
#161
DattaSujayAyyagari
opened
3 months ago
1
TypeError: argument should be integer or None, not 'numpy.float64'
#160
rugilemat
closed
3 months ago
2
installation on linux failed
#159
mocherry
opened
3 months ago
3
running with test eventalign test file file form github produces another error
#158
mocherry
opened
3 months ago
8
yet another error with m6anet dataprep
#157
mocherry
opened
3 months ago
1
error with m6anet dataprep
#156
mocherry
opened
3 months ago
1
m6anet, eventalign, galaxy
#155
mocherry
opened
4 months ago
3
Genome vs transcriptome alignment
#154
rugilemat
opened
4 months ago
4
Questions about the m6A motif
#153
Songmg-Nwafu
closed
4 months ago
1
dataprep and data.log
#152
AndreaYCT
closed
3 months ago
8
Empty Eventalign.txt for Negative Sense Viral RNA
#151
AlexFitzgeraldBryan
opened
4 months ago
1
Memory usage exploding
#150
mnsmar
opened
5 months ago
3
Question about the PCA in the paper
#149
huawen-poppy
opened
5 months ago
0
m6Anet inference output missing probability_modified values
#147
nickst85
closed
4 months ago
8
Inference JSONDecoderError
#146
sangyu
opened
6 months ago
2
Arabidopsis m6anet model for RNA004
#145
Papareddy
opened
6 months ago
2
About the RNA04 dataset to train the model
#143
charlesxu90
closed
7 months ago
0
Create CONTRIBUTING.md
#142
jonathangoeke
closed
7 months ago
0
Create CODE_OF_CONDUCT.md
#141
jonathangoeke
closed
7 months ago
0
Identification of m6A with the SG-NEx samples
#139
VikArz02
closed
8 months ago
4
Error: Single positional indexer is out of bounds error
#138
gsukrit
opened
8 months ago
1
question about species
#137
huawen-poppy
opened
9 months ago
1
About –readcount_max parameter
#136
wuy24
opened
9 months ago
0
Requesting for a test set
#135
vadanamu
opened
9 months ago
0
Questions about the m6anet inference results
#133
mumdark
opened
9 months ago
3
Modification of n_read_per_site
#131
DayeaPark
opened
10 months ago
3
transcript_position column header from data.site_proba.csv output file
#130
gsukrit
opened
11 months ago
1
fix issue with twine upload
#129
chrishendra93
closed
11 months ago
0
Release 2.1.0
#127
chrishendra93
closed
11 months ago
0
Development
#126
chrishendra93
closed
11 months ago
0
Reproducing Fig 2d,e; request for transcriptome2genome.py for dummies
#125
hengjwj
opened
11 months ago
2
update development branch
#123
jonathangoeke
closed
11 months ago
0
m6anet-inference error
#121
XichenZhao0223
opened
11 months ago
7
RNA004_HEK293T model
#120
yuukiiwa
closed
11 months ago
3
DRACH sites at the beginning or end of sequences
#119
tjprins
opened
1 year ago
1
Difference between mod_ratio and probability_modified
#118
acarmas1
closed
1 year ago
1
Eventalign.txt file is too large
#117
SEVEN-XYCHEN
opened
1 year ago
6
How to get result of miCLIP?
#116
thadasps
closed
11 months ago
1
Empty output after m6anet dataprep
#113
Albertperlas
opened
1 year ago
17
m6anet dataprep error
#112
eltonjrv
opened
1 year ago
3
M6anet setup patch
#111
chrishendra93
closed
1 year ago
0
installation issue on the 2.0.1 version
#109
eltonjrv
closed
1 year ago
4
How to: analyse training output
#108
hengjwj
closed
1 year ago
1
mod_ratio availability in data.indiv_proba.csv
#107
sunsetyerin
closed
1 year ago
1
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