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Hello,
we've been trying the updated AlphaFold2_mmseqs2 notebook hoping to be able to use AF-Multimer with a custom MSA. However setting msa_mode to custom seems to be reverting the pipeline to monom…
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Hello, thank you for great research.
In the AlphaLink paper, i think that you test without MSA in Fig.2 (e,f).
than, how can we make the dataset without MSA.
In my work, I have some test set …
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We recently discovered your AI-HDX program on GitHub, and it has proven to be extremely valuable for our research. However, while following the instructions in MSA_embedding.md, we encountered an erro…
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Thanks for providing the AF3 source!
To test AlphaFold3 using the example 7BBV provided by AlphaFold3 server, I used the following JSON file as input:
```
{
"name": "7BBV",
"modelSeeds": …
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Hello, I want to use a protein 3di sequence to get the MSA file as .a3m format, but i dont know how to do it, could you please give some suggestions? Thanks.
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I'm trying to figure out the root cause to why, when running a `dotnet build` in TeamCity, under a MSA Group Principal, the Copy task claims it was successful according to the MSBuild binlog output, b…
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Heart의 경우 클라우드 플랫폼의 핵심 Business들에 대한 코드들을 관리하게 될 텐데, 해당 코드들을 모두 Mono Repo 형식으로 관리를 할 것인지 여쭤보고 싶습니다.
MSA 아키텍쳐를 사용할거라면 굳이 모노레포를 채택하지 않아도 될 것 같아서 질문 던져봅니다.
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**Is your feature request related to a problem? Please describe.**
I started off a TB production server using [monolithic setup](https://thingsboard.io/docs/user-guide/install/docker/), works perfect…
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Traceback (most recent call last):
File "/opt/conda/bin/run_structure_prediction.py", line 274, in
app.run(main)
File "/opt/conda/lib/python3.10/site-packages/absl/app.py", line 308, in ru…
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I created unpaired and paired MSAs using jackhmmer searches and created two separate MSA contexts out of them. However, when you combine protein complex modeling with a ligand, the AllAtomStructureCon…