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Take the existing ShEX and use that as a starting point to decide by what criteria models would be able to be fully viewed (i.e. all information is displayed) in a standard annotation UI and thus mark…
kltm updated
6 months ago
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When searching species/organism on https://geneontology.cloud/home
Drosophila gets one hit
-cGAS-Sting pathway (Drosophila)
and
D.mel gets 9
-all with D.mel in title
and
taxid:7227
0
and
…
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SGD's 5fadbcf000000262 keeps popping back as production even though we're trying to delete it, so a very similar issue to https://github.com/geneontology/noctua/issues/485.
As part of annotation rev…
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From the 2023-09-14 Noctua maintenance, we loaded YeastPathways models to production and noticed that only 10 of the 220 models, which were all dated that day, would sort to the top of the Noctua land…
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From 2021-11-23 MOD imports call.
@sierramoxon
We are ready to start diffing the WB files that have come through the imports pipeline.
Here are the files to diff (1 vs 2 and then 2 vs 3) alon…
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Need to check performance of this on various-sized models.
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Hi.
Would it be possible to have the Sequence Ontology terms in NOCTUA, so we could use them in the models?
Thanks,
Jesualdo
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In this model: http://noctua-dev.berkeleybop.org/workbench/noctua-form/?model_id=gomodel%3AMGI_MGI_98956
I searched for the instance of 'cysteine-type endopeptidase....' from the MF list:
![imag…
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@LiNiMGI recently noticed that all of the mouse proteoform annotations are missing from GOC resources. In the GOC mouse gaf release (http://current.geneontology.org/products/pages/downloads.html) they…
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### Annotation Entry
- [x] Curators can autocomplete on any annotatable entity in NEO
- [x] Gene
- [x] Protein
- [x] ncRNA
- [x] Protein-containing complex (including for now)
- [x] If a curator…