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Hi,
I have run the following commands (taken from the R command history from the web-tool)
```
mSet
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Hi,,
First of all, thanks for the great package, it provides very interesting biological insights about my data!
I have two technical questions about plots that compare two datasets:
1. In "netAn…
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**Describe the icon you'd like to see and how you would use it.**
Nexus Framework for Climate, Migration, and Health
1. **Integrate Sectors to Close Policy Gaps**
o Icon Idea: Interlocking gears or…
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Utilizing Pipeliner output, perform pathway analysis in two ways:
1. Pathway analysis msigdb - Performs GSEA and/or ORA analysis using [msigdb](https://www.google.com/search?q=msigdb&rlz=1C5GCEM_enUS…
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HI guys
It is not an issue it a question regarding enrichmenet analysis.
Do you recommend running pathway analysis without FDR cutt-off so it is independent of DGE genes?
I am a bit new to rna…
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Pathway analysis become hard to interpret when we obtain a tons of differential pathways. In this scenario, grouping the pathways into different categories and showing the top n in each category may …
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- [ ] Chose only histidine and Tryptophan pathways from central database (several enzymes by pathway)
- [ ] Chose separately these families and genera: Ornithinimicrobiaceae, Streptosporangiaceae, St…
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This story is regarding the analysis for the pathways hub, detail and chapter pages.
https://www.abcam.com/en-us/technical-resources/pathways
Please follow the figma designs similar to guides.
…
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I am trying to run ggpicrust2, and am having an issue. Below is the script I'm running:
# Load necessary data: abundance data and metadata
KO_abundance_file
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### Description of feature
* [DoRothEA](https://saezlab.github.io/dorothea/) provides curated transciption factor activation signatures
* [PROGENy](https://www.bioconductor.org/packages/release/bi…