-
I noticed that kazu changed the input text. I'm curious how it made this mistake and how to prevent it.
To recreate: I passed in a text block that contained the text "The CFIm25 deletion leads …
-
Please provide as much information as you can:
* **Suggested term label:**
This is a first stab at this term, open to suggestions:
transcriptional interfering lncRNA activity
* **Definiti…
-
Please provide as much information as you can:
* **Suggested term label:**
telomerase RNA 3'-end processing
* **Definition (free text)**
Any process involved in forming the mature 3' end o…
-
We talked about this already, but I'd like to take action and update the Datastore where appropriate.
There are a number of `gene_models_main` GFFs that have the **Name** attribute starting with _g…
-
version funannotate/1.8.5
running annotate with the command
funannotate annotate -i /panfs/roc/groups/14/mcgaughs/drabe004/Funnannote_Full/MBRI_FINAL --force --busco_db actinopterygii --iprscan /…
-
Hi @kimrutherford @ValWood,
I was drafting the email to announce the changes, but I realised a few things that perhaps we should address:
* [x] A lot of "new genes" lacking references: both [pro…
-
- [x] What do we have annotated as "residue extensions"
- [ ] Curators review existing residues on catalytic activities- possibly remove?
See https://github.com/pombase/curation/issues/3729
-…
-
It is impossible to annotate sensibly. There are has 39 process terms to choose from!
I don't even know where to begin...
Should be 3 or 4 processes:
1. cotranscriptional 3’ processing of RNA po…
-
Polyadenylation should be part-of RNA 3' end processing?
This relationship was deleted in 2015, but poly adenylation IS part of 3' end processing
2015-05-11 | Deleted | RELATION | is a GO:003…
-
Hi all,
Thank you very much for developing these helpful packages!
At the 'isoseq refine' step I set the 'require-polyA' parameter thus I guess the refined molecules should have polyA tails. Howev…