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Trying to build against [OCE found in Github](https://github.com/tpaviot/oce), though I'm not sure how legitimate it is. It appears fairly well maintained.
Regardless, it fails to compile here:
```
…
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Hi dropseqpipers,
I have downsampled some single cell data to test for the quality of the results using the same number of reads per cell. I have given each of my 100 cells 10,000 reads in the fa…
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Hello,
I'm having an issue running this pipeline with a new genome index. This install works very well when aligning to human, but with a STAR index/genome/GTF file for another species it fails afte…
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Dear Xi,
many many thanks for this brilliant resource! I had one question: on https://teichlab.github.io/scg_lib_structs/methods_html/Illumina.html, the 'Truseq Read1' sequences under 'Truseq Sing…
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I'm getting the above listed error. This is odd, as I've actually run this successfully previously, with a different subset of the same input reads!
If you happen to have any insight, I'd greatly a…
kubu4 updated
2 months ago
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een bedenking: mbv create_statistics kunnen we een gemiddeld volume berekenen voor een bepaald bosreservaat.
Input daarvoor zijn idealiter de cirkelplots, daar zullen we geen kernvlakte bij betrekke…
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I've been running metaSPAdes on my dataset for about one week but it looks to be stuck on the error correction step of the pipeline and hasn't progressed since. I find it strange since I've ran metaSP…
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I've encountered the above error when using ShortStack. I've already [described the issue on the developer's repo](https://github.com/MikeAxtell/ShortStack/issues/146), but haven't gotten a response y…
kubu4 updated
2 months ago
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fastp cannot autodetect NovaSeqXPlus for automatic polyG trimming (https://github.com/OpenGene/fastp/pull/508)
verku updated
5 months ago
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Hi, sorry for asking again, but after going through the previous answers I have not found the answer that solves my problem. I have data that contains: HTOs, ADTs, 5' gex and VDJ. I'm trying to use C…