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when I ran prediction, an error occurred. how can I fix it? Thanks!
/home/gt/RF2NA/RoseTTAFold2NA/input_prep/make_rna_msa.sh: 第 9 行： [: 缺少 `]'
sed: 无法读取 rfam1.db.aa: 没有那个文件或目录
sed: 无法读取 rfam1.db.…
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The MC2 Center data model does not currently enable assay-specific metadata to be recorded. Adding these models is a critical part of supporting data sharing and reuse. Potential models to add were or…
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Hi Brian,
When I try to convert a GTF file obtained from gffread to GFF3 using the script "gtf_to_gff3_format.pl", I get the following types of Warnings and Errors on screen. I do not know what is …
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Hello,
I am working with a sc dataset of avian retina (6 samples), and I am using Seurat in R to analyze the data.
So far I have been able to run my clustering analysis and UMAP, and annotated…
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Hi all,
Previously I haven't had an issue building the app, but the latest set I have is Seurat v5, which uses layers not assays. When I try to build it, get the following error:
```r
makeShin…
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Dear Prof. Wang and other mates:
It has been a long time since I leave this project team. Currently, I am at a new lab and doing some work. Our RNA-seq data is very suitable for me to fully utilize…
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For 3 species determine number transcripts and plot length distributions..
For 3 species plot cumulative GO slim (bp)
For each sample within species (5) plot expresssion level histograms for mir…
sr320 updated
2 months ago
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Hello,
I am wondering if you have any function to pad batches with different size.
Thank you so much in advance!
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Hi!
I hope to run Souporcell on 709 cells generated from plate-based RNA-seq, in lieu of the 10x Genomics in which Souporcell is initially meant for. This dataset consist of high coverage cells of …
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Hello DcjComm developers,
First, thank you for your excellent work on the DcjComm package!
I am currently working on a project using Seurat to analyze single-cell RNA-seq data, and I would like …