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Hi Sam, its me again here.
Tried running the program again with TCGA samples, but unfortunately immediately ran into this new error.
When running the preprocessing, I realise that the tag direc…
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Hey Daniel,
I met this error when try to run bamsnap on a rna-seq bam file:
```
Process proc 1:
Traceback (most recent call last):
File "/home/cc439/anaconda3/lib/python3.7/multiprocessing/p…
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Attached is some background reading on Principal Components Analysis (PCA) and RNA-Sequencing.
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RNA Seq import into cBio
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## Background
RNA expression data associates genomic features that gives a perspective into the genetic activity within a cell medium. Experiments often relate sample and expression data to discover …
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NTR
1) RNA accumulation phenotype
synonym: " MFalpha mRNA accumulation" NARROW
APO cross-refs:
id: APO:0000224
name: RNA accumulation
namespace: observable
alt_id: YPO:0000224
def: "Abundance of a…
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Hi,
i am wondering how good is xpore detect other RNA modification like ψ and ADP-ribosylation or is it mainly designed for m6A/RNA methylation?
Thanks in advance!
Yun
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### Project short name:
CellInteractionsHNSCC
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1…
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provide info in the docs e.g., resources but do not implement as the use cases are highly custom (which assays to put where etc.)
example code:
```R
##converting to h5ad format
obj_m@active.assay
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Determine the requirements and potential options for the basis of the Pangenome Annotation RNA-seq pipeline.