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I am interested in taking data I have stored on the GPU (PyTorch CUDA Tensors containing protein coordinate information) and passing this information to OpenMM to compute the energy of a system using …
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## Sequencing Read
**In DNA sequencing, a read is an inferred sequence of base pairs (or base pair probabilities) corresponding to all or part of a single DNA fragment**. A typical sequencing experim…
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From a one-off helpdesk call with Guangrong Qin (multiomics provider)
Here is the summary of our discussion:
1. Question 1: The current biolink model doesn't cover the concept of what we want to …
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Good day, I am working on comparing the deterministic and stochastic trajectories of the polymerization of styrene in free radical reaction. I find it challenging to use the module. Attached is a sche…
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Hey all!
I'm looking for 'required' skill recommendations for our research neck of the woods and I'm thinking that GIS may be a useful one. In my mind that is 2nd tier to things like statistics, dat…
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New preprint, with co-first authors @jamieauxillos and @youvegotmyname.
Probing 3′UTRs as modular regulators of gene expression
https://doi.org/10.1101/2021.08.12.455418
1/
What we did: test the…
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Hello,
I wanted to analyze a simple label-free experiment (it's after an acid hydrolysis of a gel band). Unfortunately, the philosopher pipeline does not finish, since the PSM list is empty. Analy…
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This issue has been created to discuss the relationships of vitamins and their vitamers in CDNO and CHEBI.
**1.** We have ask CHEBI team, specially @amalik01 for clarification about the relationshi…
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Trying to analyze glycoproteomic data and received this error:
20:56:17 ERROR: Error delivering events through the bus
java.util.NoSuchElementException: Sticky note not on the bus: com.dmtavt.fra…