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Hi,
I tried to ingest an adata object pulled from the [CZI CellxGene Census](https://chanzuckerberg.github.io/cellxgene-census/). The CZI adata output does not have the gene/feature name as the in…
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## Need
I'm building an API for fetching CellGuide marker genes. I would like for it to be flexible enough to handle both cell type IDs and labels as possible inputs. I cannot currently support ter…
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**CL term**
CL:0000121 ; Purkinje cell
**Suggested revision of textual definition**
The current textual definition is embarrassingly bad
![image](https://github.com/obophenotype/cell-onto…
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This is bad because
1. it's by far the slowest components of the unit tests
2. it keeps breaking during migrations
3. we simply shouldn't hit a production instance during unit tests
The screensh…
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Please check that the term does not already exist by using the ontology search tool OLS:
https://www.ebi.ac.uk/ols4/ontologies/cl
I have not found extensive information on the exact location of na…
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The CELLxGENE Discover schema has limited metadata but strict requirements and enforcement by our validator. Each version of the schema also defines (pins) the specific release for each ontology tha…
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## Description
Currently all data is [standardized](https://github.com/chanzuckerberg/single-cell-curation/tree/main/schema/3.0.0) to include raw counts and a common vocabulary for gene and cell me…
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### Project short name:
SARSCoV2ResponseDynamics
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1NzGTOKcWXtf…
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Inquiry question: How can the cell ontology database be transformed into a web-visualized hierarchical diagram? What is the technical route to achieve this? Just like the one on this webpage: https://…
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One of the biggest advantages of [CELLXGENE Census](https://cellxgene.cziscience.com/datasets) is the fact that they've mapped all of the cell types, tissues, species, etc to common ontology terms (eg…