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I think I am running out of memory even with 392GB for running standard pipeline for molecules size of ribociclib (62 atoms). The input for python poltype.py is:
```
structure=ribociclib.sdf
scrat…
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I need to onboard at least submitters and approvers for:
- [x] Kids First
- [x] GTEx
- [x] LINCS
- [x] IDG
- [ ] SPARC
- [x] HuBMAP
- [x] HMP
- [x] ExRNA
- [x] Metabolomics
And maybe als…
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Hi, here is my transformation
here is the `.gro` and `.top` file generate by ProtoCal…
kexul updated
3 years ago
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See #46
Save file as GCT after this line
https://github.com/broadinstitute/lincs-cell-painting/blob/e6852b49992b4fa2f0d36cc07011856ebee6326a/consensus/scripts/nbconverted/build-consensus-signat…
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The profiles deposited in #34 do not include whitening normalization. Previously, (see https://github.com/broadinstitute/lincs-cell-painting/issues/4#issuecomment-620839509) I elected to leave the whi…
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Add a comment containing your interesting links and announcements here! Let us know under
which heading your post belongs (or add your own):
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There's a new dcc table with an id column that contains stable DCC identifiers. These should be used as the "moniker" described in the dashboard API spec, rather than the primary_dcc_contact.abbreviat…
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Bonjour,
Quelle surprise j'ai eu aujourd'hui en voyant ce message : Après un trop grand nombre de demande erroné et non corriger j'ai décider de vous ban.
Soit je comprend que c'est pour éviter de s…
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This issue will update and track RSVPs for upcoming Common Fund Data Ecosystem (CFDE) Cross-Pollination Events. These numbers can be found by clicking on the calendar events in groups.io and then the …
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Here is my code:
"
from cmapPy.pandasGEXpress.parse_gct import parse
f='./GSE70138_Broad_LINCS_Level5_COMPZ_n118050x12328_2017-03-06.gctx'
x=parse(f)
"
It shows:
"
UnicodeDecodeError: 'utf-8' …