-
I created a similar pipeline to get abundance of other AMR genes using some of your groups previous methodology of ublast and diamond blastx and obtained absolute counts. Since the sequencing dataset …
-
347. Synonyms of Mansion
harmya, nr̥pāgāra, ṅa gaḍuh.
AK 2.6.138ab: śayanaṁ mañcaparyaṅkapalyaṅkāḥ khaṭvayā samāḥ |
I don't understand the relevance of this quotation. My mistake or yours?
…
-
I encountered an error while running AMRFinderPlus, specifically during the **hmmsearch** step. The process terminates with a **std::runtime_error** and a core dump. Here are the detailed steps I foll…
-
For example, querying for the condition `breast cancer`, and intervention `tamoxifen` returns [260 trials on OpenTrials](https://explorer.opentrials.net/search?q=&condition=breast+cancer&intervention=…
-
Apparently REVIGO has changed format of the file that is obtained by pressing Export results to text table (CSV) in the web interface. Colum `representative` in revigo.csv file now lists GO ids inste…
-
I am trying to download sequence data from _E. coli_ samples within the state of Washington - it's about 1283 sequences, which I know is a lot. The problem that I am running into is that entrez_search…
-
After World War II, antibiotics were considered "wonder drugs", since they were easy cures for what had been intractable ailments. To learn which drug worked most effectively for which bacterial infec…
-
A good starting point is Pfam_SARS. I reviewed it a few weeks ago, and IIRC it has pretty good coverage of Betacov genes, but doesn't include some of the genes towards the 3' end found in other genera…
-
The MoA results from Lee (#15) are suggesting kinases as potential mammalian targets, and this may suggest reasons for the tox we're seeing. Some suggested targets are kinases (@danielgedder will summ…
-
We are a team of scientists based in Mount Kenya University and Jomo Kenyatta University of Agriculture and Technology – Kenya. We are specialized in Phytochemistry for the preparation of extracts and…