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## Short description of the problem
I can't install anvio-8 because of an error when building wheels for anvio and connection-pool.
## System info
System version: Ubuntu 22.04.4 LTS
I tried …
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Hi, I am locating the mapping file. Just curious about why there is no `.bam.bai` file in the `work-file`?
Thanks.
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1) Setup section has the Metagenomics lesson information, not the Pangenomics
2) For a local installation I would suggest providing the yaml files for the environments, instead of the individual inst…
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Hello,
I am trying to run concoct, I successfully used this script:
cut_up_fasta.py 58D_contigs-fixed.fa -c 10000 -o 0 --merge_last -b contigs_10K.bed > E58_contigs_10K.fa
I then go to create the …
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Hi, thanks for developing this powerful tool! I appreciate for its exceptional performance, but I encountered a specific issue while attempting to display structure (anvio's interactive stuck at still…
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Error code from run through conda installation. Input was a faa file with ORFs from Anvio.
(magiclamp) sean-mini-server:2022_PCC_ManuscriptWork sean_server$ MagicLamp.py LithoGenie -bin_dir bins -b…
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Hi,
I tried to do the installation of illumina-utils for anvio with pip-20.1.
The following error came up.
`Using cached illumina-utils-2.7.tar.gz (3.3 MB)
ERROR: Command errored out with e…
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Dear anvio teams (on others),
I am working with anvi-display-functions, using KOfam as annotation source.
I have a list of Kofams which i know to be linked with Carbon source to summarize which su…
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Greetings Anvio developers,
First off, many thanks for including so many great features in Anvio. In my current analysis, I was expecting to have to do much more bottom-up coding, but keep findin…
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## Short description of the problem
When anvi'o computes the potential of a given codon, it does so by evaluating whether mutations in one position (that is, with Hamming distance of 1) generate sy…