-
Before the official 1.0 release of the API we should do the following:
- [x] Create User Friendly API Documentation. Current API auto generated docs are not easy to read. Give general overview of A…
inodb updated
6 months ago
-
**Background**:
The [cBioPortal](www.cbioportal.org) is an open-access, open-source resource for interactive exploration of multidimensional cancer genomics data sets, which are collected from a m…
-
- [x] Show tooltip on histogram indicating the boundaries. Not super clear always where numbers are included
- [x] Fix y axis labels for survival charts
- [x] Show NA/Unknown values in comparison pa…
inodb updated
6 months ago
-
See: https://github.com/cBioPortal/cbioportal-docker-compose/pull/23/files#diff-e45e45baeda1c1e73482975a664062aa56f20c03dd9d64a827aba57775bed0d3R21-R22
TODO:
- [ ] Confirm servlet-api is still i…
inodb updated
1 month ago
-
Proposed here:
https://github.com/cBioPortal/cbioportal/pull/10829#discussion_r1662354069
`SessionServiceRequestHandler` is an HTTP client that talks to the session service. It has all low-level H…
forus updated
4 weeks ago
-
# Backend
- [ ] remove fusions from the mutation_event table and leave existing fetch mutations endpoints un-touched.
- [x] add a new web service endpoint to pull fusions out from the new structural…
jjgao updated
6 months ago
-
cBioPortal used to support mouse genes:
https://github.com/cBioPortal/cbioportal/pull/6312
All our annotations are for human
inodb updated
5 years ago
-
There is `civic.url` property to set CIVIC url.
It's documented here.
https://github.com/cBioPortal/cbioportal/blob/master/docs/portal.properties-Reference.md#civic-integration
It seems to be ign…
-
- [ ] generic assay for discrete data cBioPortal/icebox#222
- [x] add generic assay data to study view cBioPortal/cbioportal#7657
- [ ] add generic assay data to Coexpression cBioPortal/icebox#139 (le…
-
From cBioPortal/cbioportal#9223 :
We use HOMDEL in the CNA Genes table in study view but we should use DEEPDEL instead for consistency with the rest of the site
[EDIT by @inodb]: To confirm, par…