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Hello,
I apologize in advance if there are some mistakes or if my explanations is not clear. Please, do not hesitate to warn me if you have any questions.
I am an engineer who recently started using…
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`Purple` fails with the below error:
```
ERROR ~ Error executing process > 'NFCORE_ONCOANALYSER:TARGETED:PURPLE_CALLING:PURPLE (220024755)'
Caused by:
Process `NFCORE_ONCOANALYSER:TARGETED:P…
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VR needs to have a path for representing translocations.
Allele is currently defined as a contiguous sequence change at a single location. Translocations and junctions are unlikely to fit in that m…
reece updated
8 months ago
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Good morning
I am trying your software on clonality part but I am getting this error
```
> vcf_cna 'min'
```
I can share whole R object if needed
Thank you for any help
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Hi Nick,
Hope it is not too much from me. I am wondering whether you have a matric for clonality calculation under scRepertoir. Or does less index score in diversity matrix of scRepertoir such as …
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# 时间表
# 演讲者
** and **sample_copynumberprofile.p…
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Hi,
I was interested in looking at the code for the polyclone caller to see what it would take to make it output VCF records for every site. Would you be able to say a few words about how the call…
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Hello,
Thank you for the tool. Finally, there is a way to start from SNVs, CNAs and purity and perform QC and check for clonality!
I tried to run `analyze_peaks` command by changing the `min_abs…
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Hi there, thank you for this amazing tool. My team as been using it a lot (see issue #265) but when I try to reproduce the analysis I came up with a few questions.
I did 10x genomics kit 5` GEX an…