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Calculate a new fieldmap average pooling datasets from OpenNeuro that have either fieldmaps or PEPOLAR acquisitions.
The fieldmap average should NOT be masked within the brain.
Then, upload the …
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To make our life easier (especially because we are a small team that's gonna have to do a lot of data processing),
would it be possible to launch the preprocessing automatically once the data were pu…
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I was thinking about adding a set of pages right after _Preprocessing_ that could be named _Connectivity_ (containing pages such as `Connectivity/Functional` and `Connectivity/Structural`) - got any i…
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* dmriprep version: 0.5.0
* Operating System: HPC cluster
### Description
I tried to run dmriprep on our HPC cluster using singularity with the next command (SUBJ_I is an iterator to send subje…
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### What would you like changed/added and why?
Dear all,
I think for some users (me) it might be useful to have an example of how to use sdcflows as a standalone.
This might be especially due t…
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Hello,
I am getting the follow error at the end of running dMRIprep when writing the excluded gradient file. Do you have any suggestions for avoid the error:
CreateImagesOfExcludedGradients[0m
…
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**mrtrix** https://www.mrtrix.org/
**DSI Studio** http://dsi-studio.labsolver.org/
**dMRIprep** https://github.com/nipreps/dmriprep
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In order to use FSL's EddyQC with data preprocessed using qsiprep, I need to save the working directory locally using `-w WORK_DIR`.
Is there an option to save the necessary eddy files (e.g. index.…
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I know @edickie and @mattcieslak were working on this.
I would suggest adding this as a cached method (i.e., only called once and then cached) of the ``DiffusionGradientTable`` object https://githu…
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Hi,
thanks for developing and maintaining this tool.
I have installed the tool (`dmriprep` version 0.5.7) using `pip install dtiplayground` on my Ubuntu 22.04 machine, then started the tool with `…