-
This issue lists the sites with low DWI data quality
-
Hi All,
I'm trying to register each bval volume in a 4D diffusion scan to the average of b0 volumes. I'm using register_dwi_series to do so with my scan as data, and 0 as b0 ref (using the default pi…
-
This App currently outputs `neuro/dtiinit`, but I believe we could instead output `neuro/dwi` with datatype tags such as "dtiinit" or "aligned" etc.. We can then update existing App that uses `neuro/d…
-
[BEP016](https://github.com/bids-standard/bids-bep016/blob/bep-016/src/05-derivatives/05-diffusion-derivatives.md) seems to recommend the model be specified as "suffix" (e.g bs, csd, or tensor)
-
Hi there,
I get an error when trying to run fsl_topup_epi_eddy. I am using Python 3.10, and have FSL v6.0.4. I see that eddy_openmp is not located in fsl/usr/bin; it seems that it is no longer pre…
-
On Oscar's machine, `/data/derivatives/hcph-derivatives/mriqc_23.2.0` does not contain the individual report for the dwi. I thus suspect the MRIQC dwi workflow was not successful.
-
I ran into this one:
https://github.com/PennLINC/qsiprep/blob/429afc60781b74f58aa0e5d1eb9ab7433edc14bd/qsiprep/interfaces/confounds.py#L172
working with a dataset that has a pepolar acquisition…
-
I have recently been working with .tck fiber tractography files generated by MRtrix3, and all processing steps were conducted within the DWI space. However, upon attempting to open these .tck files in…
-
I got this error while running the new script version:
_line 261: cd: sub-AM267/dwi/: No such file or directory_
[err.batch_processing_sub-AM267.log](https://github.com/user-attachments/files/160696…
-
1. Side bar
2. Top bar