-
Hi, I'm trying to run Fragpipe on headless mode using Ubuntu, but I'm facing an error with the database Fasta file "ERROR - FASTA file path is empty or the file is corrupted". I've downloaded the fast…
-
Dear all,
I am using the merge_result function but finally pairwise_termsim is not working mentioning that gcsize has not been found.
```
mkk.up
-
Hi Peter
Looks like these Reactome pathway xrefs are missing:
gluconeogenesis (GO:0006094) = R-HSA-70263
fructose biosynthetic process (GO:0046370) = R-HSA-5652227
galactose catabolic process vi…
-
Sequences: EPI_ISL_19036878, PP713005.1 (Likely from the same patient, though metadata indicates that it is sequenced from baseline surveillance).
BQ.1.1 recently (March 21st 2024) sampled with inter…
-
Hello MSFrager Team,
I have been trying to analyze my glycoproteomic data (orbitrap) with MSFrager as the identifications and their confidence looks better than other search engines. But I am not a…
-
Good day everyone.
9 new sequences of a BA.2 strain were detected. Samples were collected between September and November 2023 from Gauteng, Mpumalanga and Limpopo, South Africa. NextClade assigns …
-
Dear all,
It is my pleasure to introduce to you this test (beta) version of our GlycoShape database and toolbox for glycomics and glycoanalytics. GlycoShape is our open access (OA) online repo…
-
Search motif for GlyTouCan ID G00054MO which is Sia Lewis X:
Number of sites: 102 (suspici…
-
Selecting Applicants to Interview
This summer, we will have 4 interns, 2 Bioinformatics and 2 Data Wrangling. We plan on interviewing 10 applicants in total.
- Initial Screening:
- - Receiv…
-
[log_2024-01-17_15-17-10.txt](https://github.com/Nesvilab/FragPipe/files/13978477/log_2024-01-17_15-17-10.txt)
- Describe the issue or question: I was not having any issues using a large database…