-
```
What steps will reproduce the problem?
1. install python 2.7 in debian squeeze via pythonbrewer
install RSeQC v 2.3.1-2.3.4 in custom location
2. run bam_stat.py on a bam file from ion torrent…
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Thank you for creating this valuable tool. We've found it to be the best for analyzing our data compared to other tools, but we've noticed a discrepancy in genotyping the KIR2DL5A/B genes. While other…
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### Description of the bug
Hi,
I am using the output classified reads from krakenuniq within taxprofiler and noticed that when i am using illumina (PE) i get .unmapped.merged.unclassified.fasta…
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Hello everyone, especially hg38 reference genome users!
Now bcbio has hg38 support for almost 5 years!
http://bcb.io/2015/09/17/hg38-validation/
However, many user were still on GRCh37/hg19, be…
-
### Description of the bug
Hi all,
I'm new in the 16s rRNA seq field.
Our lab used Zymo 16s primer V3-V4 but they refused to provide primer sequence.
They only provide length of primer. FW: 16…
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Should you add the freebayes license to the "combined" license here? I guess that technically, it is included in the distribution... so perhaps this is a moot point.
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Hello Gemini developers,
I am running into the following error when trying to load a vcf into gemini:
`insert error trying 1 at a time:
Traceback (most recent call last):
File "/gpfs/fs1/dat…
-
### Description of feature
Hi all,
Recently I start to analysis 16s rRNA seq.
Our lab used Zymo Quick-16S Primer Set V3-V4 for the amplicon.
However the zymo doesn't provide exact seqeunce of p…
-
Hello, how are you?
I would like to know if I can use single-end sequences from Ion Torrent and, if so, what should I do?
Thank you very much.
-
View details in Rollbar: [https://rollbar.com/jimmy.andrews/VariantGrid/items/4277/](https://rollbar.com/jimmy.andrews/VariantGrid/items/4277/)
```
UploadPipeline 4097 failed. Filename: VCF Error:…