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loom=open_loom(loomPath, mode='r')
Error in H5File.open(filename, mode, file_create_pl, file_access_pl) :
HDF5-API Errors:
error #000: ../../src/hdf5-1.10.0-1/src/H5F.c in H5Fopen(): line 57…
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Hi @aysylu, I was taking a stab at writing an alternative implementation of a weighted, undirected graph and have brushed up to a few points where we might consider tightening the API. I'm not sure ho…
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See https://docs.rs/loom/latest/loom/
It's a magical tool to help debugging concurrency issues.
There is a small downside that this has to be a compile feature, and it's not useful to the outside (i…
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Hi!
I stumbled upon your project and it seems cool. I saw a comparison w/ loom and h somead questions:
> 3. Much more accurate model of hardware reordering, as we literally just let your hardwar…
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Hello. I used velocyto to generate the loom file required to RNA Velocity using seurat wrappers. I am unable to convert the loom object to Seurat as shown in the tutorial. I get the following error. A…
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Just realized we should really be using [Loom](https://github.com/aysylu/loom/). This would make it possible to do more interesting analyses using their tools, would outsource the file handling, and w…
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I wonder if you can kindly provide some test loom files?
for example Plass2018.dge.loom.
Thanks,
Shuoguo
iiiir updated
2 years ago
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Can someone comment on Loom compatibility, please? Has it been tried recently? @aardvark179
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### Describe the bug
So I write something in my loom text cell or I add a tag or smth like that. When I unfocus that cell, for text it would be I hit enter and i cant write anymore and no cell is f…
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Hey,
I was following this notebook but it doesn't explain how one can generate this loom file hgForebrainGlut.loom. This file has reduced number of barcodes and genes too.
I have to use this anal…