-
[Breaking Lander-Waterman's Coverage Bound](http://biorxiv.org/content/early/2016/06/23/060384) - assembly
[Sparc: a sparsity-based consensus algorithm for long erroneous sequencing reads.](https://w…
-
https://github.com/EBI-Metagenomics/genomes-pipeline/blob/853487f6dda1420fd8b6b41dd4aff5c8540c7e37/bin/fetch_ena.py#L66
The method above returns nothing. I believe it's because `metagenome_source` …
-
Trying to run CAMISIM to generate a very small test metagenome data set with a mixture of eukaryotic and prokaryotic genomes to test a pipeline with, following the example in the usage guide. I am get…
-
### Is your feature request related to a problem? Please describe. For generic questions use Q&A section in the Discussions forum above.
rRNA and tRNA are thought to be difficult to be assembled from…
-
Dear metaWRAP developers,
Greetings, this is Diego Brambilla, Research Engeneer at Linnaeus University. Hope you could grant me a little of your time to address the following issue. I tried to run t…
-
## Merging reads per hostplant
As a comparative measure against population based approach, we will assemble metagenomes using all CH and CO samples separately.
```
# New directory for hostplant …
-
I have a question that is likely a little outside of your scope for help. So, if there is another resource I should consult, could you please point me in that direction?
I used metawrap to bin ass…
-
Hello,
It's appreciated for developing a such amazing tools, which combined reference-based and de novo assembly. It seems that MinYS was developed in the context of mining a particular symbiont geno…
-
Hi I am getting the following error:
sample1.fastq.gz is either empty or contains multiple entries with the same identifier. Please check your input FASTA file and execute genomad annotate again. …
-
Hi Saima;
FVE-novel is an excellent tool when I used it to recovering the viral genomes from the viral metagenome datasets, actually I obtained more draft genomes than using the normal workflow. He…