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Some of the new ZFIN models and imports have a date of format yyyy-m-d without padding i.e. 2020-3-1 and while some created with noctua have format yyyy-mm-dd i.e. 2020-03-01. From sorting point of v…
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Should RAthena and noctua support AWS Athena ml capabilities? MLcapabilities are created by sagemaker. Athena can be used to create an sql wrapper to call sagemaker models.
https://docs.aws.amazon.…
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I have three machines:
- "New" is a new heavy compute server; it is the fastest machine, with oodles of memory and cores and SSD in a fast setup
- "Old" is an aging compute server; it is very fast…
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Export as GPAD is not working, I have tried various models
Get the following Error:
Proxy Error
The proxy server received an invalid response from an upstream server.
The proxy server could not…
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Looking at this nocuta model:
https://github.com/geneontology/noctua-models/blob/master/models/542732ad00000010
Couldn't get a query for individuals using 'occurs in' to work despite finding direct …
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Checklist for everything to be produced in Noctua/Minerva pipeline
- [X] GPAD - in https://build.berkeleybop.org/view/GO/job/export-lego-to-legacy/
- [X] GAF - in https://build.berkeleybop.org/view/…
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We are working on annotation documentation for MF-to-BP relations and would like to assess the extent to which relations, other than 'part of', have been used to link MFs to BPs in Noctua.
We would…
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We are working on annotation documentation for BP-to-BP relations and would like to assess the extent to which relations, other than 'part of', have been used to link BPs to BPs in Noctua.
Can we g…
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As part of our QC, @LiNiMGI and I noticed that there are annotations not passing because they have 'invalid' relations in annotation extensions. Here is the list:
Invalid Relation in GO-Property
G…
ukemi updated
6 months ago
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Some existing models may use relations that are no longer available in the decision tree, e.g. 'positively regulates'.
We still want users to be able to delete these relations so they can replace t…