-
### Description of bug
Hello,
I am the Debian developer currently working on the packaging of SPAdes 4.0.0. It turns out the LICENSE file places the software under GPL-2, but some files are under …
pgrt updated
2 months ago
-
### Description of bug
Hi!
I am assembly soil samples, there has some samples , i try to set different params for example different memory or threads, but still not solving.
best,
wanli
### s…
-
Hi Brant,
Had the following error on sample 11 out of 39 (the first ten ran fine).
```
2020-05-09 18:25:07,173 - itero - INFO - Assembling
Traceback (most recent call last):
File "/scratch/msk…
-
redirect spades std output somewhere so it does not show in the screen
-
from #644
0120039B805DCE36776472803608
![image](https://github.com/user-attachments/assets/b1e9d864-7b3e-4066-aeda-2d3d492af773)
I don't understand the 4N.
If playing 2/1 just bidding 2S is a s…
-
**Workflow Name**
Metagenome Assembly
**Project URL**
https://nmdc-edge.org/admin/project?code=brFrthQj2C3PyUvj
**Additional Info**
```
' 0:00:07.478 34M / 579M INFO General …
-
### Description of bug
The same FASTQ files are processed normally in a virtual Linux machine (Ubuntu 22.04.02 ARM64) on a Mac M3 Max with macOS Sonoma, but fail with a 'failed to limit memory' error…
-
### Description of the bug
Bioconda recipe currently broken for SPAdes 3.15.5, updated to 4.0.0 is reported to fix the issue. Discussed on slack in this thread: https://nfcore.slack.com/archives/CE9M…
-
While running Fast-Plast the run stops with a spades-related issue.
Any suggestion to fix the issue?
thanks!
Use of uninitialized value $total_length in division (/) at /home/jorge/Fast-Plast/bin…
-
### Description of bug
Hi,
I run metaSpades on a large set of samples. It works fine when I just use the pair1 and pair2 files. But I also have merged reads for each library that I would like to u…