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Hello, We've performed Metannoatae on big metagenomic file(translated) against hmm of interest. Though we got the results, more than 99% remained to be assigned.
![canvas](https://user-images.gith…
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Change "Min percent identity" when running assign_taxonomy.py -m blast in Qiime
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Hi Joe, I am trying to use the script to assign taxonomy to some 18S sequences. For this, I have generated my own blast database from a blast search of first 10 hits for each of my sequences and tax f…
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I downloaded refseq database and run kaiju for taxonomic assignment of sample DRR496098 downloaded from SRA, in the kaiju/bin directory using the command below;
./kaiju -t ../../kaiju_db/nodes.dmp -f…
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## What is the goal of this issue?
We currently use the rewrite slugs instead of the post type or taxonomy slugs to build the direct URLs to the relevant sections in the settings, e.g. `/wp-admin/ad…
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Startup failure initialising sql. Does not seem to affect execution.
Open PP
* Help, Welcome, Open the Kommer sample file,
* File, Save As, XML with "ID" attributes, kommer.xml
```
E:\sqlite…
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Below is the complete output of a run I did last night. There are several errors in the output:
* Partial codon
* invalid value encountered in double_scalars (twice)
* RuntimeWarning: divide by z…
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Layouts may be assigned to _page types_ as well as specific individual pages.
However, many use cases would be simplified if users could assign a layout to a page and all children of that page. Or,…
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Hello! Thank you for your dedicated work on sourmash!
I've been closely following sourmash for taxonomy assignments and I'm keen on extracting specific sequences from my metagenomic datasets based …
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Hello,
I've run Centrifuge on my data, and it generated two output files: classification.txt and report.tsv. I then created a kreport.tsv file from the classification.txt file. However, I've notice…