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It would be really helpful for us to now who is using TotalSegmentator and what they are using it for. Therefore, we invite you to comment on this issue: What are you using TotalSegmentator for? What …
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As per the discussion in the community call today, I am hereby creating an "issue" to stimulate creation of a core expression data model so we can build tools that are commonly usable. (Note that Stra…
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Need to check performance of this on various-sized models.
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# Context
A new project raised some questions about the way ADS is used when analyzing large datasets with presence of pathology and great variety of axons. The dataset given to us contains features …
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_WARNING: long post below. I'm hoping to help us build a shared conceptual framework to guide ongoing API design, and given the underlying complexity and the number of different priors, don't know how…
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Hello Muscat team,
Thanks for this helpful package. As I did not have DE doing Pseudo bulk DE analysis I'm trying to run DE at cell level. In the tutorial, it does not clearly explained the steps. I …
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This is a great tool! Thank you for development. Can you please generate/provide similar T subset resources for mouse datasets? It will be greatly useful as many labs including ours generate CITE-seq …
nroak updated
2 months ago
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Dear Brendan,
I am using stdeconvolve with an 8-sample visium integrated seurat object. All samples were individually normalized with seurat's sctransform algorithm before anchor-based integration …
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It seems that the most uncontroversial way to represent this is to have the [meningeal cluster](http://purl.obolibrary.org/obo/UBERON_0010743) be surrounding yet spatially disjoint from the the brain …
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#### A reconstruction is a the broad database of reactions, and becomes a model when it is initialised with constraints.
> The difference between a reconstruction and condition-specific models deri…