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Hi,
I have the following error when running the latest version of rop:
`Traceback (most recent call last):
File "/home/projects/ssi_gen1/data/pregnancy/unmapped/rop/rop.py", line 197, in
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Hi,
I want to enquire if the RNA prep kit _**TruSeq Stranded mRNA Sample Prep Kit**_ is supported by DCC. Is there any evidence supporting this idea?
According to the chapter _**Deep Computatio…
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Hi,
I used STAR to align my paired-end reads and followed the pipeline from 'Align-Parse-Annotate'. I got a list of predicted circRNAs that perfectly match with annotated genes. The results looked …
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Hi Sir
I tried to install circtools on my PC(ubuntu 16.04) and I got the following error message. Could you help with this? Thank you
$ python3 setup.py install --verbose --user
running install
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circR updated
5 years ago
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Hi,
I got a warning message when I was running DCC and I want to know if the problem would affect the result. The warning is:
> /home/admin_g/.local/lib/python2.7/site-packages/DCC-0.4.6-py2.7.egg…
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the term for this is
GO:0015680 intracellular copper ion transport
intracellular copper delivery | exact
but I don't think this is transport, it's just insertion?
see
Cerqua C, Mor…
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creating circRNA fasta and gtf for re-alignment and quantification
[W::fai_fetch] Reference 0:89-177 not found in FASTA file, returning empty sequence
Failed to fetch sequence in 0:89-177
[W::fai_f…
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[root@VM_32_17_centos starchip]# ./Step1.sh
Filtering out chimeric reads that appear circular
Filtering circular reads based on assigned thresholds of 5 reads in 1 individuals
Argument "8680r7" is…
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I would like to see "sequence-specific regulation of translation”, “sequence-specific positive regulation of…” and "sequence-specific negative regulation of…” added to the GO ontology under the parent…
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Hello,
I have a simle question. When trying to create "known gene families and known/common false-positive pairs", I cannot find the "Associated Gene Name" under the GENE dropdown.
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