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Documentation of noiseFormula specified that its possible to specify numerical values here (conflicting with the type declaration as string), which doesn't seem to work (passing numerical values throw…
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The library does currently not care about `{initialization,objective}Prior{Type,Parameters}` that are described in the docs. Either raise error or implement functionality in `petab.sampling` (Related …
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Much of petab is based on correctness of column names like 'preequilibrationConditionId', admitted content like 'logNormal' etc.. It may make sense to create one central list of constants in order to …
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... (the measurements should be adapted, not the observableTransformation) as recently clarified in PEtab.
At least that is what i assume from the negative values there.
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I upgraded from amici 0.10.17 to 0.10.20. Afterwards, my packet manager shows
```
-mici (0.10.17)
amici (0.10.20)
```
I tried to uninstall -mici, but get an error
`no such option: -m`
When I …
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Currently this only happens for dynamic parameter overrides.
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As the library will change much more frequently, and as some users may rather be interested in the file format, it would make sense to use independent version numbers. For the data format, I'd use jus…
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I am struggling to get the ma57 solver working. @sshin23 : do you have an idea what I am doing wrong? I ran
```
sudo apt-get install gcc g++ gfortran patch wget pkg-config liblapack-dev libmetis-d…
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Id overloading is a very bad idea in general and will break many things. In this case you require ids which should be compared to experimental data to start with `observable_`.
As a consequence one h…
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According to the documentation[1] it seems that the noiseParameters column is optional, however `petablint` and pypesto import fail in this scenario with:
```
Traceback (most recent call last):
…