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Hi
Thank you for scripts to determine WSGUPS
I come up with this error when i run the command
snakemake --snakefile Snakefile --use-conda -j 8 -k
Building DAG of jobs...
Using shell: /usr/bin/b…
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## Hello @alesssia @pditommaso , much appreciation for this tool
## I haven't much experience with docker but everytime I try to pull the uniref databases from docker , using the below command:
```b…
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Hello,
I'd be grateful to anyone who could give me some advice and/or help with the following. I am running a test dataset through idba_ud. The test dataset consists of ~10 bacterial species (metagen…
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Hello. I work at North Carolina State University in the Biotechnology program. We use Qiime in our metagenomics class. The students requested that I record a tutorial on installing Qiime using Virtual…
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>Take the liberty to borrow the post owner's place. I want to ask where my error occurred. It always occurs No valid Assembly graph found.@Kinggerm
First, the code I used:get_organelle_from_reads.py …
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Hello! I'm trying to install MetAMOS on my system, but having a bit of trouble. I've run the following commands, which completed without incident:
`python INSTALL.py core`
`python INSTALL.py optio…
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I have the following output from my paired end FASTQ files. This output came after I ran "bash runbatch_Wochenende_reporting.sh
- We want to upload to WFH (might be easier) https://about.workflowhub.eu/ro-crate-api/
- If we're deploying the tu…
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hi,@asl
my command is
'metaspades.py -1 SRR9033753.rmhost.clean.1.fq.gz -2 SRR9033753.rmhost.clean.2.fq.gz -t 20 -o output'
when I run it by SPAdes-3.14.1, the task stuck when Processing rever…
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https://github.com/snayfach/MIDAS/blob/0811fef93ddd7ac070f60668958f1ca8d9b7fcfe/midas/utility.py#L111
When installed via the Bioconda channel (through miniconda/anaconda), MIDAS get's installed as …