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When opening the MSGF+ example, the MGF file wasn't shown in the selection box since ".gz" is not included. I then selected "show all files" and selected the ".gz" file. It didn't display any error me…
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Verify that in the MzID file there are NO global modifications for certain AA (e.g. "all Cysteins have a Carboxymelythelinomiol modification").
Make sure all modifications are listed individually.
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```
Section 5.1.4 of the specification states:
A is linked to the source spectrum (in an
external file) from which the identifications are made by way of a
reference in the spectrumID attribute and …
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```
On the call this was discussed at some length. There are two main aspects to
the discussion:
1. Many search-engine specific CV terms have been added that duplicate
information stored in a stand…
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The mzIdentML format offers an attribute "length" (stores the number of bases of a protein, e.g. ``). It would be nice if `psms` could return this attribute as additional column.
This is needed for s…
sgibb updated
9 years ago
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Hi all,
by following fedora64-build-script included on your source archive, i'm compiling in this order "percolator-noxml --> percolator --> fido --> converters --> elude" but this error stops the bu…
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```
At the moment only some fixed neutral losses are possible for fragmentation
information (e.g. "y-ion-H2O").
E.g. Eric and Pierre-Alain suggest to separate the ion type from the neutral
loss, e.…
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When opening the MSGF+ example, the MGF file wasn't shown in the selection box since ".gz" is not included. I then selected "show all files" and selected the ".gz" file. It didn't display any error me…
-
```
Angel will do that when we are nearly finished (together with more key
constraints for references).
```
Original issue reported on code.google.com by `eisena...@googlemail.com` on 5 Jun 2008 at …
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```
- PRIMARY KEY constraint for SpectraData/@id
- FOREIGN KEY constraint for SpectrumIdentificationResult/@SpectraData_ref
- FOREIGN KEY constraint for
AnalysisCollection/SpectrumIdentification/Input…