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Hi everyone,
I am having trouble executing the AlleleCall command. Specifically, I am running the command:
chewBBACA.py AlleleCall -i /home/daniel.araneda/analisis_vibrios/genomas_mlst -g /home/da…
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Hi,
I noticed that the beta versions of 1.1.0 changed the way HTML tags are rendered in FASTA file description fields.
In version 1.0.9, HTML entities were interpreted as HTML code, which allow…
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Right now, when `read-bioinfo-metadata` is executed for `viralrecon`, the analysis_date field is extracted from the name of the variants_long_table file using the following regex `variants_long_table_…
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Hi,
I am opening this issue to follow up an issue already mentioned here https://github.com/google/deepvariant/issues/366 regarding calling of variants in the initial and last bases of the human mi…
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In https://github.com/magicDGS/ReadTools/issues/509, @robmaz report that he has some data barcoded with mixed dual/single indexes. He attached the FASTQ files with some reads and the full table with t…
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i'm a noob in both bioinfo and rust, I am looking for a rust crate that can replace the needle function in EMBOSS
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Dear Ruofan and Professor Lei Li,
Another small question, I noticed that the software also implement several modules in annotation, which include:
xQTLanno_genomic: https://dingruofan.github.io/x…
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Very useful tool! But I encountered a problem that I can't solve.
## Error details:
```
ModuleNotFoundError Traceback (most recent call last)
Cell In[31], line 1
----> 1 anno=scsa.cell_anno(clust…
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go through and clarify what each script does
make code more general
make sure comments are clear
Combine my previous file dealing codes into a multipurpose thing
Options
Type of file extension
…
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Hello BayesTyper team,
first of all congratulations on your recent publication.
I would like to evaluate BayesTyper and compare it with my own work but I am running into some issues so I was won…