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If I want to load the peaks from server,how to make this happen?
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Hi,
I have already used SEACR to normalize the target CUT&RUN data and I've got the output bed file. When I load it in IGV, I just saw the peaks (rectangles) but not the peaks with different height…
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Hey!
Thank you for this great package!
I ran my multiomic data with the stream pipeline and found that it got stuck when generating igraphs.
Specifically in the part below. Any idea?. (I used >…
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Colouring the audio waveform by using the spectral centroid of a sequence of short-interval samples to map frequencies to colors can enhance content navigation and aid in understanding how the timbre …
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- [x] Write simple input that takes tsv or csv file with: peptidoform, spectrum_id, precursor_mz and write to Peptidoforms
- [ ] Write a function that takes a peptidoform removes modifications and ge…
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Based on my observations in the bad quality dataset, I would like to propose some modifications of the list of artifacts that can be selected.
- Add a signal drop-out artifact
- Separate head motio…
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Hi!
I just tried Fragman, however the ladder calling does not work very well with my samples. GeneMarker has no problem calling all the ladder peaks.
Fragman skips a lot of peaks, and then ends calli…
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Hi,
I would like to select a specific `bindingType` when using the `annotatePeakInBatch` function but I receive this error.
`Annotate peaks by annoPeaks, see ?annoPeaks for details.
maxgap wil…
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There should only be so many peaks expected within a certain mass range (ie 50 dalton range should only have a max of two peaks, one from each terminus).
Additionally, high mass peaks tend to be good…
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`fseq2 idr` fails for me due to KDEpy:
```
$ fseq2 idr \
--samples \ …