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Explore the status of open science in Kenya through literature search and data mining. The idea is to analyze how open science tools have been used in research. For example, for a given period of time…
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Hello Chebi Team,
This compound was created some times ago from a request available in issue #2766
It is
(3E,5Z,7E,9E,11R,12S)-11-{[(**2R**)-2-amino-2-carboxyethyl]sulfanyl}-12-hydroxyhexadeca-3,…
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Hey @tillea @mr-c
pinging you since I'm about to release a new feature for Diamond to directly read BLAST databases. I'm doing this by linking against the shared libraries from NCBI, all of which ar…
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It would be nice to be able to have the option of calling variants from bisulfite data.
It shouldn't be too tricky to add [Bis-SNP](https://github.com/dnaase/Bis-tools) or something similar as a ne…
ewels updated
2 years ago
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- ~~[BMC Bioinformatics](https://bmcbioinformatics.biomedcentral.com/about)~~ (already submitted and rejected)
> *BMC Bioinformatics* is an open access, peer-reviewed journal that considers articl…
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Hello everyone,
I building GTDB databases to be used along with Kraken2. I was wondering if it was possible to add viral refseq sequences while building kraken2 databases? GTDB consists of archaeal a…
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I've been doing a lot of prefix mapping across various registries and been pleasently surprised to find few conflicts. Unfortunately, both the Geographical Entity Ontology and the Gene Expression Omni…
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* pharokka version: 1.7.2
* python version: I use mamba to run commands? But my mamba version is 1.2.0
* Operating System: MAC
### Description
Hello, I am trying to detect phages in .fna (FAST…
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We need from each sub-group is a contribution of 2-3 paragraphs describing your group's hackathon successes and ongoing activities. Also (to save Mark look-up time) please list all authors from your …
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- [x] [Cooper GF. A simple algorithm for efficiently mining observational databases for causal relationships](https://www.dbmi.pitt.edu/sites/default/files/Cooper_9.pdf)
- [x] [Detection of pharmacov…