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Hi,
I just check out your great work entiltled "Somatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure".
Would you like to explain how you analyze the f…
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Hi,
I wonder is there code to recreate the result of DNABERT in paper
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Hi Fabio,
Q: "what are cell types in chromatin accessibility similar to lung fibroblast in human".
It doesn't gives proper follow up question, so I couldn't specific what genes I want to use.
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Please enter any comments you have on the revised version of the FOF-CT on ReadTheDoc (https://fish-omics-format.readthedocs.io/en/update_docs_caterina_rahi/index.html#)
as a comment on this issue.
…
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For MGI gene model Zfp750 (MGI:MGI:2442210)(model ID: gomodel:653b0ce600001157 ), I noticed that:
annotation preview missing the ISO annotations:
Zap750
promoter-specific chromatin binding GO:19…
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https://doi.org/10.1101/172767 (http://www.biorxiv.org/content/early/2017/08/06/172767)
> Determining the binding locations of regulatory factors, such as transcription factors and histone modifica…
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![1](https://user-images.githubusercontent.com/10727217/184626040-5605dfa3-6ed0-4310-bf45-ad148df8417a.png)
![2](https://user-images.githubusercontent.com/10727217/184626048-1bb9fb09-059f-467d-a4cd…
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Hi there,
I can't unzip the file. Please help.
Thanks,
Clayton
1.
[ckc620@qhimem0001 Kai]$ ls
mESC_cStates_HMM.zip
2.
[ckc620@qhimem0001 Kai]$ unzip mESC_cStates_HMM.zip
Archive: mESC_cStat…
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### Lung-specific gene expression
- Identify the expression pattern for the marker genes of tissue-resident T cells
- [ ] integrate chromatin profiles with expression to validate the utility of …
j3gu updated
11 months ago