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Thank you so much for sharing this pipeline!
I would like to re-use this to build a pipeline to call crispr off target effects. Unfortunately this repository lacks a License and thus formally canno…
votti updated
1 month ago
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cld is not able to access the gene_list.txt file (and will presumably also fail to read the params.txt).
Command used to run cld:
`docker run -v $PWD boutroslab/cld_docker cld --task=end_to_end -…
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- [x] Discuss problem definition with @nick-youngblut
- [x] Perform exploratory and test data analysis on existing datasets
- [This repo](https://github.com/abearab/ScreenPro-Benchmarking)
- [x] …
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Hello!
I was just wondering if this software would be useful to determine full haplotypes or quasispecies in "multiple" CRISPR edited polyclonal mixtures (for example 2 sgRNA's cutting close to each …
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The following code does not find a `cas9` hit, when it should. Changing the input guide to uppercase solves the issue
```
from pydna.dseqrecord import Dseqrecord
from pydna.crispr import cas9, pr…
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The only option is to define based on mean. I need to add an option to define based on median.
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Share the papers that you've identified as relevant to our reproducibility discussion here. You do not need to note in this issue which ones fall into each category.
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Could you please help me with this issue here?
Here is my code:
python /home/disk1/PhaBOX/main.py --contigs test_contigs.fa --threads 20 --rootpth ./tst.PhaBOX --dbdir /home/disk1/PhaBOX/databas…
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Claro, aquí te proporciono una guía básica sobre seguridad web:
Utilizar HTTPS: Es esencial asegurarse de que tu sitio web esté protegido con HTTPS, lo que significa que se utiliza el protocolo SSL/T…
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