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PMID: 31303374
Species: Human
Tissue: Brain
Paper title: A Single-Cell Transcriptomic Atlas of Human Neocortical Development during Mid-gestations
Paper link: https://pubmed.ncbi.nlm.nih.gov/31303…
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There is a profile where the user has used a different coordinate system in their paper and gEAR dataset (SWNE instead of tsne /UMAP). In the single cell workbench, it has a primary analysis available…
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Marie Deprez et al.
A Single-Cell Atlas of the Human Healthy Airways
https://www.atsjournals.org/doi/10.1164/rccm.201911-2199OC
GEO:
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE143868
E…
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Hi,
I've used sceasy before with no issues. But this time, i tried to convert an h5ad file to a seurat object and got this error
```
Error in h(simpleError(msg, call)) :
error in evaluating…
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### Related problem
The primary motivation of splitting this repo out of https://github.com/FCP-INDI/C-PAC is to clarify and document what the prepackaged templates are and where they are from.
…
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**Collection/dataset this task is for:**
- Title: AdultLungElo - A spatial multi-omics atlas of the human lung reveals a novel immune cell survival niche#236
- Project Short Name: AdultLungElo
- ticke…
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**Describe the problem concisely**.
Many biological problems are first studied in nonhuman animals, and those cell types are often carefully characterized in e.g. mouse. We would like to take the c…
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[https://hypothes.is/](Hypothes.is) is a web annotation platform that enables us to take notes anywhere in the web.
They have a [system to export annotations](https://web.hypothes.is/help/how-do-i…
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Hi,
This data
`associations.01112014: processed cell type and gene association data downloaded from EBI Expression Atlas (http://www.ebi.ac.uk/gxa/)
`
from the E16.5.Rda example data set ca…
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Hi,
I have been getting this error: ZeroDivisionError: float division by zero
when trying to run the following code:
``
de.test.wald(
data=adata_human,
gene_names=adata_human.var_name…