-
Hello all,
Very happy with the tools - thank you for maintaining them and integrating with LAMMPS. I am running some vacuum simulations and while increasing the number of GPUs (and mpi ranks), I r…
nec4 updated
2 months ago
-
Hello ,
Is it currently possible to do random plane cut using only the meshCut function and randomly generated planes ? Do I have to run recursively the meshCut function to get this effect ?
![scree…
-
Dear authors,
I pulled the docker image as what is suggested in the introduction and run the scripts using a container create from it.
I installed waterz and elf as instructed.
I met an error whe…
PG-Gu updated
4 months ago
-
I'm trying to do NPT calculations in LAMMPS using `pair_allegro`, but the Allegro model I trained is predicting `-nan` for the system pressure, so the NPT run fails. If I run under NVE or NVT, includi…
-
Hi, I've recently been studying the theory related to multicut, and at the same time I've been studying your code, and I'm very thankful that you've open-sourced such a systematic tool.
I have writ…
-
Hi!
This is how I got the error:
* Start new multicut workflow
* Load several 3d volumes from h5 files, including probabilities and ground truth
* Selected one of the 3d volumes and ran water…
-
I am trying to move ara on VCS, but met too many errors, and they are hard to fix.
Do you have the correct Compilation Options on VCS or irun? Or a script of running by VCS?
These are examples of…
-
**TL; DR;**
I need axi single-beat transactions with good throughput. The axi_riscv_atomics module seems to limit the number of outstanding transactions.
**Context**
I am integrating an AXI mast…
-
Hi,
I am trying to use plantseg gui to perform segmentation of cells in confocal images.
I am however, encountering this issue with patch size constantly. The size of the images is (1024,1024,3,3…
-
Hi
Thank you for making this software available.
I would like to use nuclear prediction label map from StarDist for the Lifted MultiCut segmentation as part of the Plantseg workflow.
I had a l…