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cc @dosumis
We will create a subset either in RO, or as a separate bridge file. This will be used to generate the set used to construct edges in GO models. This could be achieved via some complex fi…
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Following discussion with @balhoff , we concluded that we should:
- [x] Stop Minerva from adding import statements onto new or edited models
- [x] Ensure that OWL Object Property declarations are …
goodb updated
3 years ago
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the dev branch of noctua-models contains a bunch of models that share their IRI with another model
e.g. I see a model named WB_WBGene00011688 and a model named 323f7ea5-6d4b-4d54-a555-386c6df7a9c6
…
goodb updated
3 years ago
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Complete this issue with a user story (with illustrations) for how we would like to see curators make use of **Reactome models as templates for new models**.
Answer:
In this use context, what is…
goodb updated
2 years ago
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Examples:
- functions that lack occurs_in or enabled_by
- Assertions that lack evidence
- Models that lack processes
- Models with ClassAssertions to a deprecated class (#279)
Not sure if this should…
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Hi,
In looking over some annotation stats with @pgaudet and @ukemi this morning, we found that there are still some production GO-CAM models that have GO_Noctua in the Assigned_by field of the outp…
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Spotted as part of the MGI imports. From more complicated GO-CAM models we are generating these two annotations:
MGI | MGI:1919358 | is_active_in | GO:0016020 | PMID:25267624 | ECO:0000315 | MGI:MG…
ukemi updated
2 years ago
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Hi,
We touched on this issue somewhat in #69 , but I don't think we've quite gotten this sorted out.
The issue here is how individual complex members will be annotated for any associated MF and …
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Just to make it consistence with noctua dev server vs noctua production. Separate branches for dev and for production server for testing purposes and playgrounds
What are your thoughts
@kltm @ba…
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I used the "directness" qualifier, I always select "direct", but this resolves in the pathway diagram as dotted lines instead of solid lines.